CDS
| Accession Number | TCMCG017C17372 |
| gbkey | CDS |
| Protein Id | OMO90008.1 |
| Location | complement(join(138294..138387,138479..138653,138774..138942,139546..139764,139855..140022,140108..140293,140453..140537,140894..141138,141257..141556)) |
| GeneID | InterPro:IPR001394 |
| Organism | Corchorus olitorius |
| locus_tag | COLO4_19462 |
Protein
| Length | 546aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215141, BioSample:SAMN03160584 |
| db_source | AWUE01016633.1 |
| Definition | Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 [Corchorus olitorius] |
| Locus_tag | COLO4_19462 |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | U4 U6.U5 tri-snRNP-associated protein |
| KEGG_TC | - |
| KEGG_Module |
M00354
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12847
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAAAACTAAAAGAGAAGATGGTGATAGTGTAGATAGGGAAGGGGACTTGAAACGCCAGAGAGTTGCTGATTATCCATCTTCACCTTCTGAAGGGCCACTAGTGCCTTATAATGATGATGACGATGATGAAAGGAGGGCATTGAGTCGGGTTGGCGGTGAAGGGAATGGCCACAGAGTTGAAAGTGAAGAAGATGAAGATGATGATGATCCATATGGGCAAGGATCAATTGCAGGGTGGCAAAATCGCCAGGTTGAAGTACGGAGAGACTGTCCTTACCTTGATACTGTTAACCGCCAGGTGCTAGATTTTGATTTTGAGAAGTTTTGTTCAGTCTCTTTGTCGAACTTGAATGTCTATGCATGCCTGGTCTGTGGGAAGTATTACCAAGGAAGAGGGAAAAAGTCCCATGCTTATACTCATAGTTTAGAAGCGGGACATCATGTCTACATCAATCTTCGAACAGAGAAGGTGTATTGTCTTCCTGATGGATATGAAATTAATGACCCATCATTGGATGATATTCGTTATGTTCTAAACCCAAGGTTTACCAGAGAACAAGTGGAACAACTTGACAGGAACAAGCAATGGTCCAGAGCACTTGATGGTTCAGATTACCTTCCAGGAATGGTGGGGCTGAACAATATTCAAAAGACTGATTTTGTAAATGTCACCATTCAATCTTTAATGAGAGTTACTCCCTTAAGGAACTTTTTCCTTATCCCTGAAAATTACCAGCATTGTAAATCTCAACTTGTTCAACGATTTGGAGAGCTGACACGAAAGATTTGGCATGCTCGAAACTTTAAAGGACAGGTAAGCCCTCATGAATTCTTACAAGCAGTTATGAAAGCCAGTAAGAAACGGTTTCGAATCGGTGCACAGTCTGAGCCTGTTGAGTTCATATCATGGCTTCTTAACACACTGCACGCGGATCTTAAAACTAAAAAGAATAGTAGAAGCATCATCCATAAGTGCTTTCAGGGGGAGCTGGAGGTTGTTAAAGAGACGCAGAACAAAGCTATCACTGAGAAGAAAGAAAGTAGTGGGGAAGAAAATGGAACTCCAAAAACTGAGGATGGTGTTACCAAGAAGGATAACATTGGTGCTGAAACTTACAGAATGCCCTTTTTAATGCTTGGGTTGGATTTGCCCGAACCACCTTTATTCAAAGATGTCATGGAGAAAAATATAATACCTCAGGTTCCTTTGTTCAATATATTGAAGAAGTTTGATGGTGAGACAGTAACGACTACTGTTCGTCCTCCAGCGAGGATGAGATATCGTGTCACCAAGTTGCCACAGTATTTGATAGTTCACATGCGCCGCTTTACTAAGAATAATTTCTTCAGAGAAAAGAACCCAACATTGGTGAACTTTCCTGTGAAAAACCTAGAGTTGAAGGACTACATTCCTCTTCCAGCACCAACGAAAGAGAATGAAAAATTGCGCTCCAAGTATGATCTTATTGCTAATATTGTTCATGATGGTAAGCCTGATGAGGGGTTCTACAGGGTGTTTGTACAGCGGAAATCAGAGGAATTATGGTACGAGATGCAAGATCTGCACGTGTCTGAAACACTTCCTCAAATGGTTGCACTATCCGAAGCTTATATGCAGATATATGAGCAACAACAGTAG |
| Protein: MKTKREDGDSVDREGDLKRQRVADYPSSPSEGPLVPYNDDDDDERRALSRVGGEGNGHRVESEEDEDDDDPYGQGSIAGWQNRQVEVRRDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRYVLNPRFTREQVEQLDRNKQWSRALDGSDYLPGMVGLNNIQKTDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSQLVQRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSEPVEFISWLLNTLHADLKTKKNSRSIIHKCFQGELEVVKETQNKAITEKKESSGEENGTPKTEDGVTKKDNIGAETYRMPFLMLGLDLPEPPLFKDVMEKNIIPQVPLFNILKKFDGETVTTTVRPPARMRYRVTKLPQYLIVHMRRFTKNNFFREKNPTLVNFPVKNLELKDYIPLPAPTKENEKLRSKYDLIANIVHDGKPDEGFYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYMQIYEQQQ |